BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004H05LP1|AL425294
(884 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1751 1715 0.0
>3x_Contig1751
Length = 24682
Score = 1715 bits (858), Expect = 0.0
Identities = 872/884 (98%)
Strand = Plus / Minus
Query: 1 gagagggttttgtttattcggtaccatgaaaagaagactcaaaaattmcaaaatamcaga 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 23207 gagagggttttgtttattcggtaccatgaaaagaagactcaaaaattccaaaataccaga 23148
Query: 61 aagggacccacatgavactggcattaaagaattgtgcattaacgttcctcgattataaag 120
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23147 cagggacccacatgacactggcattaaagaattgtgcattaacgttcctcgattataaag 23088
Query: 121 stamaaaaacatatatgtsattttagatacaccattgtaatttagaaataagtscaaatc 180
|| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23087 ctacaaaaacatatatgtcattttagatacaccattgtaatttagaaataagtccaaatc 23028
Query: 181 aattgcacttggtgctggattattccatccatctcgttgtctttgtgttttcgaaccctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23027 aattgcacttggtgctggattattccatccatctcgttgtctttgtgttttcgaaccctg 22968
Query: 241 acgcatgttgataagaattctgctatttaggtcttggcttcctaaggstgctctgttttt 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 22967 acgcatgttgataagaattctgctatttaggtcttggcttcctaaggctgctctgttttt 22908
Query: 301 cgaggaattttgtaaaaatttgatttttacaaacattgaaaatttttggtcaattgaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22907 cgaggaattttgtaaaaatttgatttttacaaacattgaaaatttttggtcaattgaaaa 22848
Query: 361 atgaacttcaacacctaccatttacttttcaaccggatatttcttgggatacattcattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22847 atgaacttcaacacctaccatttacttttcaaccggatatttcttgggatacattcattt 22788
Query: 421 cagaacctcaacttccaccgtgggttccaccagcgtsactatgttttacttccccgatag 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 22787 cagaacctcaacttccaccgtgggttccaccagcgtcactatgttttacttccccgatag 22728
Query: 481 asatggttcgatgctttttatttggtggttaatgttctcttcatgagagatcattgattt 540
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22727 acatggttcgatgctttttatttggtggttaatgttctcttcatgagagatcattgattt 22668
Query: 541 cgatccacggtagataaatggttttattaaagatgtatctccagctattgataaagagtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22667 cgatccacggtagataaatggttttattaaagatgtatctccagctattgataaagagtt 22608
Query: 601 cggagcctttttcttcgagctcgcttttacaaatctgatatagttggtcataattctttc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22607 cggagcctttttcttcgagctcgcttttacaaatctgatatagttggtcataattctttc 22548
Query: 661 gacatttttggttttcaagttgtttctcttttatctttttcttctcatctatataaaacg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22547 gacatttttggttttcaagttgtttctcttttatctttttcttctcatctatataaaacg 22488
Query: 721 tatccttgaatatataatggttaaacatatccattatcgaagaactacacaattattctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22487 tatccttgaatatataatggttaaacatatccattatcgaagaactacacaattattctt 22428
Query: 781 gtagagtttcttattgttctttcaattggattctcaatcctgcactgtttattttaaaaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22427 gtagagtttcttattgttctttcaattggattctcaatcctgcactgtttattttaaaaa 22368
Query: 841 aagtgtattgtgtttacgtgtttgtgcttctttctkttctatct 884
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 22367 aagtgtattgtgtttacgtgtttgtgcttctttctgttctatct 22324
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8267
Number of Sequences: 1807
Number of extensions: 8267
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 884
length of database: 10,358,551
effective HSP length: 16
effective length of query: 868
effective length of database: 10,329,639
effective search space: 8966126652
effective search space used: 8966126652
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)